WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40D4.6.1 Sequence Name  F40D4.6.1
Length (nt)  894   Chromosome Location  V: 17174038-17175530
Chromosome . Primary Identifier  V Chromosome Location . Start  17174038
Chromosome Location . End  17175530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40D4.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009567 srbc-25 F40D4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40D4.6 F40D4.6 894   V: 17174038-17174150

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.6.1 17174038 17175530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213565   113   V: 17174038-17174150 Caenorhabditis elegans
Exon213566   226   V: 17174202-17174427 Caenorhabditis elegans
Exon213567   207   V: 17174836-17175042 Caenorhabditis elegans
Exon213568   99   V: 17175091-17175189 Caenorhabditis elegans
Exon213569   99   V: 17175237-17175335 Caenorhabditis elegans
Exon213570   150   V: 17175381-17175530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40D4.6.1 17174038 17175530 1

1 Sequence

Length
894

1 Sequence Ontology Term

Identifier Name Description
transcript