WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47H4.1a Sequence Name  F47H4.1a
Length (nt)  753   Chromosome Location  V: 17348830-17348901
Chromosome . Primary Identifier  V Chromosome Location . Start  17348830
Chromosome Location . End  17348901
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47H4.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16062 LSY-27, isoform a 27.8 250 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047698
WBRNAi00015216
WBRNAi00032461
WBRNAi00115846
WBRNAi00062256

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47H4.1a 17348830 17348901 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009834 lsy-27 F47H4.1 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47H4.1a 17348830 17348901 -1
CDS:F47H4.1a 17348958 17349571 -1
CDS:F47H4.1a 17349995 17350061 -1

1 Sequence

Length
753

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47H4.1a.1 F47H4.1a.1 1050   V: 17348665-17350193