WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20E11.12.2 Sequence Name  F20E11.12.2
Length (nt)  1176   Chromosome Location  V: 17440427-17441890
Chromosome . Primary Identifier  V Chromosome Location . Start  17440427
Chromosome Location . End  17441890 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20E11.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005370 srh-154 F20E11.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20E11.12 F20E11.12 993   V: 17440556-17440874

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20E11.12.2 17440427 17441890 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon214043   33   V: 17440427-17440459 Caenorhabditis elegans
Exon214044   9   V: 17440475-17440483 Caenorhabditis elegans
Exon214045   344   V: 17440531-17440874 Caenorhabditis elegans
Exon214047   194   V: 17440987-17441180 Caenorhabditis elegans
Exon214049   304   V: 17441245-17441548 Caenorhabditis elegans
Exon214050   292   V: 17441599-17441890 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20E11.12.2 17440427 17441890 1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
transcript