WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C38D9.2 Sequence Name  C38D9.2
Length (nt)  1482   Chromosome Location  V: 17569380-17569389
Chromosome . Primary Identifier  V Chromosome Location . Start  17569380
Chromosome Location . End  17569389
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38D9.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47350 C38D9.2 56.7 493 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00042166
WBRNAi00007590
WBRNAi00011760
WBRNAi00082481
WBRNAi00082584

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C38D9.2 17569380 17569389 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008010 C38D9.2 C38D9.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C38D9.2 17569380 17569389 1
CDS:C38D9.2 17569756 17569953 1
CDS:C38D9.2 17570002 17570180 1
CDS:C38D9.2 17570350 17570593 1
CDS:C38D9.2 17570653 17571158 1
CDS:C38D9.2 17571209 17571508 1
CDS:C38D9.2 17571559 17571603 1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C38D9.2.1 C38D9.2.1 2166   V: 17567150-17571739
Transcript:C38D9.2.2 C38D9.2.2 3784   V: 17567163-17571742
Transcript:C38D9.2.3 C38D9.2.3 1760   V: 17567513-17571703
Transcript:C38D9.2.4 C38D9.2.4 1811   V: 17568466-17571742