WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y80D3A.1.1 Sequence Name  Y80D3A.1.1
Length (nt)  2018   Chromosome Location  V: 18852704-18859221
Chromosome . Primary Identifier  V Chromosome Location . Start  18852704
Chromosome Location . End  18859221 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006945 wars-1 Y80D3A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y80D3A.1 Y80D3A.1 1254   V: 18853451-18853750

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.1.1 18852704 18859221 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216863   1047   V: 18852704-18853750 Caenorhabditis elegans
Exon216864   486   V: 18856082-18856567 Caenorhabditis elegans
Exon216865   308   V: 18857769-18858076 Caenorhabditis elegans
Exon216866   177   V: 18859045-18859221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.1.1 18852704 18859221 -1

1 Sequence

Length
2018

1 Sequence Ontology Term

Identifier Name Description
transcript