WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y80D3A.10.1 Sequence Name  Y80D3A.10.1
Length (nt)  443   Chromosome Location  V: 18903772-18906252
Chromosome . Primary Identifier  V Chromosome Location . Start  18903772
Chromosome Location . End  18906252 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y80D3A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013588 mihp-2 Y80D3A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y80D3A.10 Y80D3A.10 279   V: 18903777-18903858

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.10.1 18903772 18906252 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon216906   87   V: 18903772-18903858 Caenorhabditis elegans
Exon216907   110   V: 18905176-18905285 Caenorhabditis elegans
Exon216908   246   V: 18906007-18906252 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y80D3A.10.1 18903772 18906252 1

1 Sequence

Length
443

1 Sequence Ontology Term

Identifier Name Description
transcript