WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39B6A.19a.1 Sequence Name  Y39B6A.19a.1
Length (nt)  1104   Chromosome Location  V: 19060173-19067034
Chromosome . Primary Identifier  V Chromosome Location . Start  19060173
Chromosome Location . End  19067034 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39B6A.19a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006696 twk-46 Y39B6A.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39B6A.19a Y39B6A.19a 960   V: 19060190-19060329

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.19a.1 19060173 19067034 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217136   157   V: 19060173-19060329 Caenorhabditis elegans
Exon217138   92   V: 19061780-19061871 Caenorhabditis elegans
Exon217140   207   V: 19063221-19063427 Caenorhabditis elegans
Exon217142   122   V: 19063558-19063679 Caenorhabditis elegans
Exon217144   330   V: 19065451-19065780 Caenorhabditis elegans
Exon217146   196   V: 19066839-19067034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39B6A.19a.1 19060173 19067034 1

1 Sequence

Length
1104

1 Sequence Ontology Term

Identifier Name Description
transcript