WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43F8A.5 Sequence Name  Y43F8A.5
Length (nt)  1428   Chromosome Location  V: 19385052-19385226
Chromosome . Primary Identifier  V Chromosome Location . Start  19385052
Chromosome Location . End  19385226
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8A.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21884 SLCR-46.2 53.2 475 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056502
WBRNAi00019963
WBRNAi00019965
WBRNAi00020548
WBRNAi00037051

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43F8A.5 19385052 19385226 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012811 slcr-46.2 Y43F8A.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43F8A.5 19385052 19385226 -1
CDS:Y43F8A.5 19385835 19385991 -1
CDS:Y43F8A.5 19386231 19386464 -1
CDS:Y43F8A.5 19386533 19386716 -1
CDS:Y43F8A.5 19387686 19387852 -1
CDS:Y43F8A.5 19388049 19388211 -1
CDS:Y43F8A.5 19388484 19388634 -1
CDS:Y43F8A.5 19389818 19389930 -1
CDS:Y43F8A.5 19390037 19390120 -1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43F8A.5.1 Y43F8A.5.1 1670   V: 19384819-19390129