WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25F9.2.1 Sequence Name  C25F9.2.1
Length (nt)  4633   Chromosome Location  V: 19421471-19426774
Chromosome . Primary Identifier  V Chromosome Location . Start  19421471
Chromosome Location . End  19426774 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007723 C25F9.2 C25F9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25F9.2 C25F9.2 4572   V: 19421471-19421825

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25F9.2.1 19421471 19426774 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon217673   355   V: 19421471-19421825 Caenorhabditis elegans
Exon217674   340   V: 19421883-19422222 Caenorhabditis elegans
Exon217675   250   V: 19422271-19422520 Caenorhabditis elegans
Exon217676   162   V: 19422567-19422728 Caenorhabditis elegans
Exon217677   284   V: 19422777-19423060 Caenorhabditis elegans
Exon217678   213   V: 19423105-19423317 Caenorhabditis elegans
Exon217679   230   V: 19423365-19423594 Caenorhabditis elegans
Exon217680   758   V: 19423637-19424394 Caenorhabditis elegans
Exon217681   303   V: 19424443-19424745 Caenorhabditis elegans
Exon217682   219   V: 19424795-19425013 Caenorhabditis elegans
Exon217683   223   V: 19425058-19425280 Caenorhabditis elegans
Exon217684   474   V: 19425332-19425805 Caenorhabditis elegans
Exon217685   279   V: 19425853-19426131 Caenorhabditis elegans
Exon217686   257   V: 19426185-19426441 Caenorhabditis elegans
Exon217687   286   V: 19426489-19426774 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25F9.2.1 19421471 19426774 1

1 Sequence

Length
4633

1 Sequence Ontology Term

Identifier Name Description
transcript