WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y116F11B.12a Sequence Name  Y116F11B.12a
Length (nt)  1770   Chromosome Location  V: 19881656-19881751
Chromosome . Primary Identifier  V Chromosome Location . Start  19881656
Chromosome Location . End  19881751
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y116F11B.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26046 GLY-4, isoform a 67.0 589 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00055476
WBRNAi00027751
WBRNAi00115339

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y116F11B.12a 19881656 19881751 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001629 gly-4 Y116F11B.12 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y116F11B.12a 19881656 19881751 -1
CDS:Y116F11B.12a 19882447 19882521 -1
CDS:Y116F11B.12a 19882807 19883047 -1
CDS:Y116F11B.12a 19887180 19887263 -1
CDS:Y116F11B.12a 19887408 19887500 -1
CDS:Y116F11B.12a 19888337 19888655 -1
CDS:Y116F11B.12a 19890464 19890995 -1
CDS:Y116F11B.12a 19892170 19892391 -1
CDS:Y116F11B.12a 19892555 19892662 -1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y116F11B.12a.2 Y116F11B.12a.2 2065   V: 19881372-19892673
Transcript:Y116F11B.12a.1 Y116F11B.12a.1 2189   V: 19881374-19895350