WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y113G7A.6a Sequence Name  Y113G7A.6a
Length (nt)  1176   Chromosome Location  V: 20054081-20054184
Chromosome . Primary Identifier  V Chromosome Location . Start  20054081
Chromosome Location . End  20054184
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y113G7A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31090 TTX-1, isoform a 41.8 391 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00065644
WBRNAi00055387
WBRNAi00055388
WBRNAi00106223

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.6a 20054081 20054184 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006652 ttx-1 Y113G7A.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y113G7A.6a 20054081 20054184 -1
CDS:Y113G7A.6a 20055639 20055886 -1
CDS:Y113G7A.6a 20056116 20056207 -1
CDS:Y113G7A.6a 20056863 20057013 -1
CDS:Y113G7A.6a 20057135 20057358 -1
CDS:Y113G7A.6a 20058543 20058701 -1
CDS:Y113G7A.6a 20059485 20059553 -1
CDS:Y113G7A.6a 20059674 20059754 -1
CDS:Y113G7A.6a 20064127 20064174 -1

1 Sequence

Length
1176

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y113G7A.6a.1 Y113G7A.6a.1 1539   V: 20053720-20064176