WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02E2.2.1 Sequence Name  K02E2.2.1
Length (nt)  3134   Chromosome Location  V: 20356772-20365773
Chromosome . Primary Identifier  V Chromosome Location . Start  20356772
Chromosome Location . End  20365773 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02E2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001700 grd-11 K02E2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02E2.2 K02E2.2 2934   V: 20356917-20357037

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02E2.2.1 20356772 20365773 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon219368   266   V: 20356772-20357037 Caenorhabditis elegans
Exon219369   116   V: 20357084-20357199 Caenorhabditis elegans
Exon219370   156   V: 20357243-20357398 Caenorhabditis elegans
Exon219371   196   V: 20357962-20358157 Caenorhabditis elegans
Exon219372   195   V: 20358208-20358402 Caenorhabditis elegans
Exon219373   107   V: 20359215-20359321 Caenorhabditis elegans
Exon219374   807   V: 20359372-20360178 Caenorhabditis elegans
Exon219375   375   V: 20360691-20361065 Caenorhabditis elegans
Exon219376   120   V: 20361110-20361229 Caenorhabditis elegans
Exon219377   177   V: 20361271-20361447 Caenorhabditis elegans
Exon219382   136   V: 20364521-20364656 Caenorhabditis elegans
Exon219383   42   V: 20365129-20365170 Caenorhabditis elegans
Exon219384   257   V: 20365223-20365479 Caenorhabditis elegans
Exon219385   60   V: 20365534-20365593 Caenorhabditis elegans
Exon219386   124   V: 20365650-20365773 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02E2.2.1 20356772 20365773 1

1 Sequence

Length
3134

1 Sequence Ontology Term

Identifier Name Description
transcript