WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3g.1 Sequence Name  W01F3.3g.1
Length (nt)  7122   Chromosome Location  V: 20667234-20678160
Chromosome . Primary Identifier  V Chromosome Location . Start  20667234
Chromosome Location . End  20678160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3g W01F3.3g 7122   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3g.1 20667234 20678160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220087   46   V: 20667234-20667279 Caenorhabditis elegans
Exon220098   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220106   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220118   262   V: 20668449-20668710 Caenorhabditis elegans
Exon220126   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220129   718   V: 20669027-20669744 Caenorhabditis elegans
Exon220142   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220150   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220164   1413   V: 20673147-20674559 Caenorhabditis elegans
Exon220173   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220181   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220189   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220198   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220202   158   V: 20678003-20678160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01F3.3g.1 20667234 20678160 1

1 Sequence

Length
7122

1 Sequence Ontology Term

Identifier Name Description
transcript