WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01F3.3h.1 Sequence Name  W01F3.3h.1
Length (nt)  7954   Chromosome Location  V: 20667234-20678530
Chromosome . Primary Identifier  V Chromosome Location . Start  20667234
Chromosome Location . End  20678530 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01F3.3h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012186 mlt-11 W01F3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01F3.3h W01F3.3h 7584   V: 20667234-20667279

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3h.1 20667234 20678530 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220088   46   V: 20667234-20667279 Caenorhabditis elegans
Exon220099   132   V: 20667329-20667460 Caenorhabditis elegans
Exon220107   128   V: 20667515-20667642 Caenorhabditis elegans
Exon220119   262   V: 20668449-20668710 Caenorhabditis elegans
Exon220127   224   V: 20668760-20668983 Caenorhabditis elegans
Exon220135   745   V: 20669027-20669771 Caenorhabditis elegans
Exon220143   957   V: 20670007-20670963 Caenorhabditis elegans
Exon220151   255   V: 20671017-20671271 Caenorhabditis elegans
Exon220155   1578   V: 20671459-20673036 Caenorhabditis elegans
Exon220158   141   V: 20673147-20673287 Caenorhabditis elegans
Exon220166   129   V: 20674431-20674559 Caenorhabditis elegans
Exon220174   285   V: 20674605-20674889 Caenorhabditis elegans
Exon220182   1704   V: 20674941-20676644 Caenorhabditis elegans
Exon220190   225   V: 20676691-20676915 Caenorhabditis elegans
Exon220199   615   V: 20676964-20677578 Caenorhabditis elegans
Exon220203   528   V: 20678003-20678530 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W01F3.3h.1 20667234 20678530 1

1 Sequence

Length
7954

1 Sequence Ontology Term

Identifier Name Description
transcript