WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.3c.1 Sequence Name  W07A8.3c.1
Length (nt)  1648   Chromosome Location  V: 20729948-20739060
Chromosome . Primary Identifier  V Chromosome Location . Start  20729948
Chromosome Location . End  20739060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001043 dnj-25 W07A8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.3c W07A8.3c 1326   V: 20730269-20730412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.3c.1 20729948 20739060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220378   465   V: 20729948-20730412 Caenorhabditis elegans
Exon220384   129   V: 20731190-20731318 Caenorhabditis elegans
Exon220388   96   V: 20731618-20731713 Caenorhabditis elegans
Exon220404   92   V: 20736240-20736331 Caenorhabditis elegans
Exon220408   129   V: 20736382-20736510 Caenorhabditis elegans
Exon220412   116   V: 20736560-20736675 Caenorhabditis elegans
Exon220416   332   V: 20737371-20737702 Caenorhabditis elegans
Exon220420   191   V: 20738726-20738916 Caenorhabditis elegans
Exon220424   98   V: 20738963-20739060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.3c.1 20729948 20739060 -1

1 Sequence

Length
1648

1 Sequence Ontology Term

Identifier Name Description
transcript