WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A8.5.1 Sequence Name  W07A8.5.1
Length (nt)  1043   Chromosome Location  V: 20734958-20736180
Chromosome . Primary Identifier  V Chromosome Location . Start  20734958
Chromosome Location . End  20736180 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012321 srxa-6 W07A8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A8.5 W07A8.5 987   V: 20734983-20735217

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.5.1 20734958 20736180 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220397   260   V: 20734958-20735217 Caenorhabditis elegans
Exon220398   173   V: 20735263-20735435 Caenorhabditis elegans
Exon220399   108   V: 20735475-20735582 Caenorhabditis elegans
Exon220400   267   V: 20735633-20735899 Caenorhabditis elegans
Exon220401   235   V: 20735946-20736180 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07A8.5.1 20734958 20736180 1

1 Sequence

Length
1043

1 Sequence Ontology Term

Identifier Name Description
transcript