WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03D8.1b.1 Sequence Name  T03D8.1b.1
Length (nt)  3158   Chromosome Location  V: 20833087-20837595
Chromosome . Primary Identifier  V Chromosome Location . Start  20833087
Chromosome Location . End  20837595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03D8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003830 num-1 T03D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03D8.1b T03D8.1b 1206   V: 20835615-20836148

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1b.1 20833087 20837595 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon220694   103   V: 20833087-20833189 Caenorhabditis elegans
Exon220700   375   V: 20833398-20833772 Caenorhabditis elegans
Exon220705   372   V: 20834025-20834396 Caenorhabditis elegans
Exon220713   1265   V: 20834884-20836148 Caenorhabditis elegans
Exon220715   274   V: 20836320-20836593 Caenorhabditis elegans
Exon220720   266   V: 20836775-20837040 Caenorhabditis elegans
Exon220727   503   V: 20837093-20837595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03D8.1b.1 20833087 20837595 1

1 Sequence

Length
3158

1 Sequence Ontology Term

Identifier Name Description
transcript