WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25C8.2a Sequence Name  F25C8.2a
Length (nt)  1353   Chromosome Location  V: 20898970-20899090
Chromosome . Primary Identifier  V Chromosome Location . Start  20898970
Chromosome Location . End  20899090
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25C8.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52859 AMX-3, isoform a 51.6 450 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00045482
WBRNAi00013857
WBRNAi00091510

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25C8.2a 20898970 20899090 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25C8.2a 20898970 20899090 -1
CDS:F25C8.2a 20899163 20899419 -1
CDS:F25C8.2a 20900518 20900964 -1
CDS:F25C8.2a 20901028 20901247 -1
CDS:F25C8.2a 20901296 20901600 -1
CDS:F25C8.2a 20903439 20903441 -1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25C8.2a.1 F25C8.2a.1 1756   V: 20898840-20903714