WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE30589 Name  EGL-8, isoform b
Molecular Weight (kDa)  160.9 Length  1431
Organism  Caenorhabditis elegans MD5 Checksum  3b44a7b3f5bbbb516d34adf707e5227c
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1431
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4b B0348.4b 4296   V: 21007-21090

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

34 Motifs

WormBase ID
Active_site
PFSCAN:PS50004
INTERPRO:IPR000008
INTERPRO:IPR035892
SMART:SM00239
PFAM:PF00168
SUPERFAMILY:SSF49562
SUPERFAMILY:SSF47473
INTERPRO:IPR011992
SUPERFAMILY:SSF50729
SUPERFAMILY:SSF51695
INTERPRO:IPR017946
INTERPRO:IPR000909
INTERPRO:IPR001192
INTERPRO:IPR001711
HMMPANTHER:PTHR10336
PFSCAN:PS50008
PFSCAN:PS50007
PFAM:PF00388
PFAM:PF00387
PRINTS:PR00390
SMART:SM00149
SMART:SM00148
INTERPRO:IPR015359
INTERPRO:IPR016280
INTERPRO:IPR037862
SUPERFAMILY:SSF69989
PIRSF:PIRSF000956
PFAM:PF09279
PFAM:PF17787