WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE17353 Name  TPA-1, isoform a
Molecular Weight (kDa)  80.3 Length  704
Organism  Caenorhabditis elegans MD5 Checksum  cacedaa1b65d50df7ec9d0763cd4a64b
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
704
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0545.1a B0545.1a 2115   IV: 92052-92077

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
Active_site
INTERPRO:IPR035892
SUPERFAMILY:SSF49562
PFSCAN:PS50081
SMART:SM00109
SCANPROSITE:PS00479
INTERPRO:IPR046349
SUPERFAMILY:SSF57889
PFAM:PF00130
INTERPRO:IPR002219
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
SCANPROSITE:PS00108
SCANPROSITE:PS00107
PFSCAN:PS51285
SMART:SM00133
INTERPRO:IPR000961
HMMPANTHER:PTHR24351
INTERPRO:IPR017892
PFAM:PF00433
INTERPRO:IPR020454
PRINTS:PR00008
INTERPRO:IPR014376
PIRSF:PIRSF000551
PhosphoPep:B0545.1a
PFAM:PF21494