WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE32793 Name  PTP-3, isoform c
Molecular Weight (kDa)  137.8 Length  1216
Organism  Caenorhabditis elegans MD5 Checksum  d8d5137b802a8359e2ce6e36326d0537
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1216
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1c C09D8.1c 3651   II: 11002983-11003250

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

21 Motifs

WormBase ID
Active_site
INTERPRO:IPR003595
INTERPRO:IPR029021
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
PFSCAN:PS50055
PRINTS:PR00700
INTERPRO:IPR013783
PFSCAN:PS50056
SCANPROSITE:PS00383
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
PFAM:PF00041
HMMPANTHER:PTHR19134
INTERPRO:IPR050348