WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE47147 Name  PKS-1, isoform a
Molecular Weight (kDa)  865.0 Length  7752
Organism  Caenorhabditis elegans MD5 Checksum  f957c562d07daf6fc4e5631a0383697b
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
7752
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41A3.1a C41A3.1a 23259   X: 5413810-5413895

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

53 Motifs

WormBase ID
INTERPRO:IPR029058
SUPERFAMILY:SSF53474
Active_site
SUPERFAMILY:SSF51735
INTERPRO:IPR036291
SUPERFAMILY:SSF52777
INTERPRO:IPR045851
SUPERFAMILY:SSF56801
INTERPRO:IPR000873
INTERPRO:IPR042099
PFAM:PF00501
SCANPROSITE:PS00012
PFAM:PF00550
SUPERFAMILY:SSF47336
PFSCAN:PS50075
INTERPRO:IPR009081
INTERPRO:IPR036736
INTERPRO:IPR001242
PFAM:PF00668
INTERPRO:IPR023213
INTERPRO:IPR020806
SMART:SM00823
SUPERFAMILY:SSF53901
INTERPRO:IPR016039
INTERPRO:IPR016035
SUPERFAMILY:SSF52151
SMART:SM00822
INTERPRO:IPR001031
PFAM:PF00975
SMART:SM00825