WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cuffdiff algorithm was used. FPKM >= 1 was used as threshold across all tissues profiled for defining expressed genes. Description  Transcription factors expressed exclusively in intestine, according to mRNA-tagging and RNAseq studies.
Primary Identifier  WBPaper00046338:pharynx_unique
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. pharynx esophagus WBbt:0003681

13 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans
WBGene00000476 cfi-1 T23D8.8 Caenorhabditis elegans
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
WBGene00003610 nhr-11 ZC410.1 Caenorhabditis elegans
WBGene00007242 madf-5 C01G12.1 Caenorhabditis elegans
WBGene00007929 dmd-10 C34D1.1 Caenorhabditis elegans
WBGene00009539 F38C2.7 F38C2.7 Caenorhabditis elegans
WBGene00010010 gmeb-2 F53H4.5 Caenorhabditis elegans
WBGene00010936 ztf-14 M163.2 Caenorhabditis elegans
WBGene00011376 gla-3 T02E1.3 Caenorhabditis elegans
WBGene00019751 M03D4.4 M03D4.4 Caenorhabditis elegans
WBGene00020408 T10D4.6 T10D4.6 Caenorhabditis elegans
WBGene00019598 K09H9.7 K09H9.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

0 Regulated By Gene

0 Regulated By Molecule