WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE30258 Name  SMG-1, isoform a
Molecular Weight (kDa)  265.5 Length  2322
Organism  Caenorhabditis elegans MD5 Checksum  042ee64533adcb3c7fcd18fb636b1e27
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2322
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48B6.6a C48B6.6a 6969   I: 6901549-6901626

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

18 Motifs

WormBase ID
INTERPRO:IPR011009
SUPERFAMILY:SSF56112
INTERPRO:IPR016024
SUPERFAMILY:SSF48371
INTERPRO:IPR036940
PFSCAN:PS50290
PFAM:PF00454
INTERPRO:IPR000403
SMART:SM00146
INTERPRO:IPR003152
HMMPANTHER:PTHR11139
PFSCAN:PS51190
SMART:SM01343
PFAM:PF02260
PFSCAN:PS51189
INTERPRO:IPR050517
PFAM:PF15785
INTERPRO:IPR031559