WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE53181 Name  HIM-4, isoform e
Molecular Weight (kDa)  559.9 Length  5100
Organism  Caenorhabditis elegans MD5 Checksum  f7bc560b07983914d9fe27a8869d8008
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
5100
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15G9.4e F15G9.4e 15303   X: 9718417-9718480

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

28 Motifs

WormBase ID
INTERPRO:IPR036465
SUPERFAMILY:SSF53300
SCANPROSITE:PS01186
PFSCAN:PS50026
SCANPROSITE:PS01187
SMART:SM00179
PFAM:PF07645
SMART:SM00181
INTERPRO:IPR000742
SCANPROSITE:PS00010
INTERPRO:IPR001881
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF07679
INTERPRO:IPR013098
SMART:SM00408
PFAM:PF13927
HMMPANTHER:PTHR10075
SUPERFAMILY:SSF57184
INTERPRO:IPR049883
INTERPRO:IPR009030
INTERPRO:IPR013106
SMART:SM00406