WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Analysis of gene expression data was carried out with the Affymetrix Transcriptome Analysis Console. Data preprocessing (using RMA normalization) and QC metrics were performed using Affymetrix Expression Console TM and manually inspected afterwards. Expression analysis was carried out for each two pairwise conditions. FDR statistical correction for multiple testing resulted in a slightly lower number of DEGs in most cases. P-value < 0.05 and fold change > 2.0 were used to determine differentially expressed genes. Description  Genes from N2 animals with significantly decreased expression after 72 hours of treatment on growth media with 250uM allantoin in 2% DMSO.
Primary Identifier  WBPaper00048989:N2_allantoin_downregulated

0 Anatomy Terms

968 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans
WBGene00000035 ace-1 W09B12.1 Caenorhabditis elegans
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000150 apm-1 F55A12.7 Caenorhabditis elegans
WBGene00000175 aqp-7 M02F4.8 Caenorhabditis elegans
WBGene00000182 arf-1 B0336.2 Caenorhabditis elegans
WBGene00000207 asb-2 F02E8.1 Caenorhabditis elegans
WBGene00000210 asg-2 C53B7.4 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000219 asp-6 F21F8.7 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000225 atgp-2 C38C6.2 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000268 bre-3 B0464.4 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000276 byn-1 F57B9.5 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000281 cah-3 K05G3.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
allantoin WBMol:00001665