WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE34003 Name  RGEF-1, isoform a
Molecular Weight (kDa)  74.0 Length  654
Organism  Caenorhabditis elegans MD5 Checksum  3a5748cc1c686dcb6bf7ba2b744ec22a
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
654
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B3.3a F25B3.3a 1965   V: 9556716-9556830

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
INTERPRO:IPR023578
INTERPRO:IPR036964
INTERPRO:IPR001895
INTERPRO:IPR008937
HMMPANTHER:PTHR23113
PFSCAN:PS50009
PFSCAN:PS50212
SMART:SM00147
PFAM:PF00617
SUPERFAMILY:SSF48366
SMART:SM00054
PFAM:PF13499
SUPERFAMILY:SSF47473
PFSCAN:PS50222
SCANPROSITE:PS00018
INTERPRO:IPR002048
INTERPRO:IPR011992
PFSCAN:PS50081
SMART:SM00109
SCANPROSITE:PS00479
INTERPRO:IPR046349
SUPERFAMILY:SSF57889
PFAM:PF00130
INTERPRO:IPR002219
INTERPRO:IPR020454
PRINTS:PR00008