WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48086 Name  RGEF-1, isoform b
Molecular Weight (kDa)  73.8 Length  653
Organism  Caenorhabditis elegans MD5 Checksum  f13b01c92019d0d1f50281f2872239c6
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
653
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B3.3b F25B3.3b 1962   V: 9556716-9556830

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
INTERPRO:IPR023578
INTERPRO:IPR036964
INTERPRO:IPR001895
INTERPRO:IPR008937
HMMPANTHER:PTHR23113
PFSCAN:PS50009
PFSCAN:PS50212
SMART:SM00147
PFAM:PF00617
SUPERFAMILY:SSF48366
SMART:SM00054
PFAM:PF13499
SUPERFAMILY:SSF47473
PFSCAN:PS50222
SCANPROSITE:PS00018
INTERPRO:IPR002048
INTERPRO:IPR011992
PFSCAN:PS50081
SMART:SM00109
SCANPROSITE:PS00479
INTERPRO:IPR046349
SUPERFAMILY:SSF57889
PFAM:PF00130
INTERPRO:IPR002219
INTERPRO:IPR020454
PRINTS:PR00008