WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE53363 Name  PKN-1, isoform b
Molecular Weight (kDa)  126.7 Length  1131
Organism  Caenorhabditis elegans MD5 Checksum  fa38c85f5c9ca65bc2f5bc4dc223b64f
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1131
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.2b F46F6.2b 3396   X: 10397396-10397874

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

22 Motifs

WormBase ID
Active_site
INTERPRO:IPR035892
SUPERFAMILY:SSF49562
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
SCANPROSITE:PS00108
SCANPROSITE:PS00107
PFSCAN:PS51285
SMART:SM00133
INTERPRO:IPR000961
HMMPANTHER:PTHR24351
INTERPRO:IPR017892
PFAM:PF00433
SMART:SM00742
PFAM:PF02185
INTERPRO:IPR011072
SUPERFAMILY:SSF46585
INTERPRO:IPR036274