WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE47418 Name  DCR-1
Molecular Weight (kDa)  218.4 Length  1910
Organism  Caenorhabditis elegans MD5 Checksum  aa27d0ec2e5e95333884532c8e30aba3
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1910
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12H4.8 K12H4.8 5733   III: 8072110-8072167

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

40 Motifs

WormBase ID
Active_site
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR036085
SMART:SM00949
PFSCAN:PS50821
SUPERFAMILY:SSF101690
INTERPRO:IPR003100
PFAM:PF02170
INTERPRO:IPR001650
INTERPRO:IPR014001
PFSCAN:PS50137
PFSCAN:PS51194
SUPERFAMILY:SSF54768
PFSCAN:PS51192
PFAM:PF00271
SMART:SM00490
SMART:SM00487
SUPERFAMILY:SSF69065
INTERPRO:IPR036389
SCANPROSITE:PS00517
SMART:SM00535
PFAM:PF00636
PFSCAN:PS50142
INTERPRO:IPR000999
INTERPRO:IPR006935
PFAM:PF04851
INTERPRO:IPR005034
HMMPANTHER:PTHR14950
PFAM:PF03368