WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K12H4.8 Sequence Name  K12H4.8
Length (nt)  5733   Chromosome Location  III: 8072110-8072167
Chromosome . Primary Identifier  III Chromosome Location . Start  8072110
Chromosome Location . End  8072167
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12H4.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47418 DCR-1 218.4 1910 Caenorhabditis elegans
 

Other

65 RNAi

WormBase ID
WBRNAi00084933
WBRNAi00084932
WBRNAi00084937
WBRNAi00084936
WBRNAi00084941
WBRNAi00084940
WBRNAi00084943
WBRNAi00084942
WBRNAi00084935
WBRNAi00084934
WBRNAi00084939
WBRNAi00084938
WBRNAi00098862
WBRNAi00098861
WBRNAi00098860
WBRNAi00075590
WBRNAi00065487
WBRNAi00050693
WBRNAi00025961
WBRNAi00027417
WBRNAi00077540
WBRNAi00061324
WBRNAi00080905
WBRNAi00077677
WBRNAi00077853
WBRNAi00017068
WBRNAi00094398
WBRNAi00062926
WBRNAi00005454
WBRNAi00097783

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K12H4.8 8072110 8072167 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000939 dcr-1 K12H4.8 Caenorhabditis elegans

27 Locations


Feature . Primary Identifier
Start End Strand
CDS:K12H4.8 8072110 8072167 -1
CDS:K12H4.8 8072220 8072599 -1
CDS:K12H4.8 8072702 8072797 -1
CDS:K12H4.8 8072846 8073092 -1
CDS:K12H4.8 8073151 8073317 -1
CDS:K12H4.8 8073367 8073513 -1
CDS:K12H4.8 8073564 8073750 -1
CDS:K12H4.8 8073807 8074032 -1
CDS:K12H4.8 8074601 8074916 -1
CDS:K12H4.8 8074960 8075265 -1
CDS:K12H4.8 8075315 8075496 -1
CDS:K12H4.8 8075543 8076135 -1
CDS:K12H4.8 8076196 8076526 -1
CDS:K12H4.8 8076644 8076794 -1
CDS:K12H4.8 8076845 8076913 -1
CDS:K12H4.8 8076955 8077134 -1
CDS:K12H4.8 8077243 8077609 -1
CDS:K12H4.8 8077678 8077832 -1
CDS:K12H4.8 8077879 8078121 -1
CDS:K12H4.8 8078166 8078294 -1
CDS:K12H4.8 8078339 8078521 -1
CDS:K12H4.8 8078954 8079325 -1
CDS:K12H4.8 8079378 8079517 -1
CDS:K12H4.8 8079583 8079742 -1
CDS:K12H4.8 8079788 8079921 -1
CDS:K12H4.8 8080016 8080178 -1
CDS:K12H4.8 8080224 8080274 -1

1 Sequence

Length
5733

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K12H4.8.1 K12H4.8.1 5883   III: 8071967-8080281