WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE27773 Name  SMA-1, isoform b
Molecular Weight (kDa)  470.0 Length  4063
Organism  Caenorhabditis elegans MD5 Checksum  1833f80ac8274b98c2d5bb7c6329f725
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
4063
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R31.1b R31.1b 12192   V: 11901350-11901370

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

29 Motifs

WormBase ID
PFSCAN:PS50003
SMART:SM00233
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFSCAN:PS50002
INTERPRO:IPR036028
SMART:SM00326
SUPERFAMILY:SSF50044
INTERPRO:IPR001452
PFAM:PF07653
PFSCAN:PS50021
INTERPRO:IPR036872
SCANPROSITE:PS00019
SMART:SM00033
SCANPROSITE:PS00020
PFAM:PF00307
INTERPRO:IPR001715
SUPERFAMILY:SSF47576
HMMPANTHER:PTHR11915
SMART:SM00150
PFAM:PF00435
INTERPRO:IPR002017
INTERPRO:IPR018159
SUPERFAMILY:SSF46966
PRINTS:PR00683
INTERPRO:IPR001605
PFAM:PF15410
INTERPRO:IPR041681