WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differences in gene expression were then calculated using the negative binomial test in the DESeq package (FDR = 0.1). Description  Transcripts that showed significantly increased expression in lin-22(icb38) comparing to in N2 at L3 larva.
Primary Identifier  WBPaper00053295:lin-22(icb38)_upregulated
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0 Anatomy Terms

902 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000048 acr-9 C40C9.2 Caenorhabditis elegans
WBGene00000062 acr-23 F59B1.9 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000106 alg-2 T07D3.7 Caenorhabditis elegans
WBGene00000108 alh-2 K04F1.15 Caenorhabditis elegans
WBGene00000135 amt-3 M195.3 Caenorhabditis elegans
WBGene00000160 apb-1 Y71H2B.10 Caenorhabditis elegans
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000241 bbs-1 Y105E8A.5 Caenorhabditis elegans
WBGene00000242 bbs-2 F20D12.3 Caenorhabditis elegans
WBGene00000244 bbs-8 T25F10.5 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000280 cah-2 D1022.8 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans
WBGene00000296 cat-2 B0432.5 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003008 lin-22 Y54G2A.1 Caenorhabditis elegans

0 Regulated By Molecule