WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE42641 Name  IGDB-1
Molecular Weight (kDa)  113.7 Length  1029
Organism  Caenorhabditis elegans MD5 Checksum  39277df8f9a83826d5dc8d29238a8a4f
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1029
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T04A11.3 T04A11.3 3090   IV: 12479011-12481047

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

22 Motifs

WormBase ID
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
PFAM:PF01682
INTERPRO:IPR002602
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
INTERPRO:IPR006150
SMART:SM00289
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF00041
SMART:SM00408
PFAM:PF00047
INTERPRO:IPR013151
HMMPANTHER:PTHR46957
INTERPRO:IPR050713