WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE46548 Name  PXF-1, isoform f
Molecular Weight (kDa)  132.4 Length  1188
Organism  Caenorhabditis elegans MD5 Checksum  1cac37038bd197f11d43ef4a6cbae4f1
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1188
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2f T14G10.2f 3567   IV: 10165839-10165852

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

32 Motifs

WormBase ID
INTERPRO:IPR023578
INTERPRO:IPR036964
PFAM:PF00618
INTERPRO:IPR000651
INTERPRO:IPR001895
INTERPRO:IPR008937
HMMPANTHER:PTHR23113
PFSCAN:PS50009
PFSCAN:PS50212
SMART:SM00147
PFAM:PF00617
SUPERFAMILY:SSF48366
SMART:SM00229
INTERPRO:IPR001478
PFAM:PF00595
SUPERFAMILY:SSF50156
INTERPRO:IPR036034
SUPERFAMILY:SSF54236
INTERPRO:IPR029071
PFSCAN:PS50106
SMART:SM00228
INTERPRO:IPR014710
SCANPROSITE:PS00720
PFSCAN:PS50200
SUPERFAMILY:SSF51206
PFSCAN:PS50042
INTERPRO:IPR000595
INTERPRO:IPR018490
SMART:SM00100
SMART:SM00314