WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE41939 Name  LRK-1
Molecular Weight (kDa)  266.3 Length  2393
Organism  Caenorhabditis elegans MD5 Checksum  98958df8c690399d76c2d60916baa6b6
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2393
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27C10.6 T27C10.6 7182   I: 10879964-10880123

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

33 Motifs

WormBase ID
Active_site
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR036322
SUPERFAMILY:SSF50978
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
PFSCAN:PS50088
SMART:SM00248
PFSCAN:PS50297
INTERPRO:IPR036770
PRINTS:PR01415
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
SUPERFAMILY:SSF52058
INTERPRO:IPR032675
HMMPANTHER:PTHR24198
INTERPRO:IPR003591
SMART:SM00369
PFAM:PF13855
INTERPRO:IPR001611
PFSCAN:PS51450
SMART:SM00364
PFSCAN:PS51424
PFAM:PF16095