WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE52434 Name  TTN-1, isoform l
Molecular Weight (kDa)  866.9 Length  7843
Organism  Caenorhabditis elegans MD5 Checksum  c53c6b99a7e2a4b13e8e2dced12437ef
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
7843
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06H8.8l W06H8.8l 23532   V: 6121577-6121636

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

31 Motifs

WormBase ID
Active_site
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
PFSCAN:PS50835
SCANPROSITE:PS00108
SCANPROSITE:PS00107
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF07679
INTERPRO:IPR013098
PFAM:PF00041
SMART:SM00408
PFAM:PF13927
PRINTS:PR00014
HMMPANTHER:PTHR12231
INTERPRO:IPR051170
INTERPRO:IPR013106