WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48717 Name  PLX-1, isoform b
Molecular Weight (kDa)  218.1 Length  1956
Organism  Caenorhabditis elegans MD5 Checksum  e5a8783823d97b967e7783b08aacfe60
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1956
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AL.1b Y55F3AL.1b 5871   IV: 959521-959658

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
INTERPRO:IPR015943
INTERPRO:IPR013783
SUPERFAMILY:SSF81296
INTERPRO:IPR014756
SUPERFAMILY:SSF48350
INTERPRO:IPR008936
HMMPANTHER:PTHR22625
PFSCAN:PS51004
PFAM:PF20170
PFAM:PF01403
PFAM:PF18020
PFAM:PF08337
PFAM:PF17960
INTERPRO:IPR046800
SMART:SM00630
SMART:SM00429
SMART:SM00423
PFAM:PF01833
INTERPRO:IPR002165
INTERPRO:IPR002909
INTERPRO:IPR013548
INTERPRO:IPR016201
PFAM:PF01437
SUPERFAMILY:SSF103575
SUPERFAMILY:SSF101912
INTERPRO:IPR001627
INTERPRO:IPR031148
INTERPRO:IPR036352
INTERPRO:IPR041019
INTERPRO:IPR041362