WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AL.1b Sequence Name  Y55F3AL.1b
Length (nt)  5871   Chromosome Location  IV: 959521-959658
Chromosome . Primary Identifier  IV Chromosome Location . Start  959521
Chromosome Location . End  959658
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AL.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48717 PLX-1, isoform b 218.1 1956 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00066949
WBRNAi00057519
WBRNAi00021029
WBRNAi00077048
WBRNAi00098896
WBRNAi00098895
WBRNAi00065916

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AL.1b 959521 959658 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004047 plx-1 Y55F3AL.1 Caenorhabditis elegans

24 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AL.1b 959521 959658 1
CDS:Y55F3AL.1b 960846 960975 1
CDS:Y55F3AL.1b 963030 963145 1
CDS:Y55F3AL.1b 964140 964441 1
CDS:Y55F3AL.1b 965737 965982 1
CDS:Y55F3AL.1b 967066 967331 1
CDS:Y55F3AL.1b 967901 968037 1
CDS:Y55F3AL.1b 968662 968978 1
CDS:Y55F3AL.1b 969803 970056 1
CDS:Y55F3AL.1b 971064 971245 1
CDS:Y55F3AL.1b 971307 971414 1
CDS:Y55F3AL.1b 971876 971982 1
CDS:Y55F3AL.1b 972373 972922 1
CDS:Y55F3AL.1b 973764 973914 1
CDS:Y55F3AL.1b 974470 974641 1
CDS:Y55F3AL.1b 975269 975394 1
CDS:Y55F3AL.1b 975450 975599 1
CDS:Y55F3AL.1b 976199 976658 1
CDS:Y55F3AL.1b 977242 977751 1
CDS:Y55F3AL.1b 978858 979211 1
CDS:Y55F3AL.1b 980654 980812 1
CDS:Y55F3AL.1b 981560 981993 1
CDS:Y55F3AL.1b 982729 983116 1
CDS:Y55F3AL.1b 983596 983709 1

1 Sequence

Length
5871

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AL.1b.1 Y55F3AL.1b.1 6554   IV: 959521-984392