WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE06671 Name  VPS-15, isoform a
Molecular Weight (kDa)  152.4 Length  1354
Organism  Caenorhabditis elegans MD5 Checksum  ec7788105e9547aecd2f4d5da153c70c
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1354
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK930.1a ZK930.1a 4065   II: 11908889-11908990

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

24 Motifs

WormBase ID
Active_site
INTERPRO:IPR015943
INTERPRO:IPR036322
PFAM:PF00400
SUPERFAMILY:SSF50978
INTERPRO:IPR001680
PFSCAN:PS50082
PFSCAN:PS50294
SMART:SM00320
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
INTERPRO:IPR016024
SUPERFAMILY:SSF48371
PFSCAN:PS50077
INTERPRO:IPR011989
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
SCANPROSITE:PS00108
HMMPANTHER:PTHR17583
PFAM:PF22956
INTERPRO:IPR045162
INTERPRO:IPR055231