WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK930.1a Sequence Name  ZK930.1a
Length (nt)  4065   Chromosome Location  II: 11908889-11908990
Chromosome . Primary Identifier  II Chromosome Location . Start  11908889
Chromosome Location . End  11908990
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK930.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06671 VPS-15, isoform a 152.4 1354 Caenorhabditis elegans
 

Other

17 RNAi

WormBase ID
WBRNAi00098951
WBRNAi00059830
WBRNAi00059831
WBRNAi00022229
WBRNAi00092321
WBRNAi00076902
WBRNAi00038501
WBRNAi00062502
WBRNAi00092318
WBRNAi00092317
WBRNAi00092316
WBRNAi00023395
WBRNAi00023910
WBRNAi00024195
WBRNAi00024282
WBRNAi00080481
WBRNAi00099141

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK930.1a 11908889 11908990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014151 vps-15 ZK930.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK930.1a 11908889 11908990 -1
CDS:ZK930.1a 11909041 11909346 -1
CDS:ZK930.1a 11909397 11910135 -1
CDS:ZK930.1a 11910188 11910422 -1
CDS:ZK930.1a 11910892 11911136 -1
CDS:ZK930.1a 11911188 11911389 -1
CDS:ZK930.1a 11911437 11911686 -1
CDS:ZK930.1a 11911739 11912010 -1
CDS:ZK930.1a 11912419 11912728 -1
CDS:ZK930.1a 11913221 11913433 -1
CDS:ZK930.1a 11913488 11913878 -1
CDS:ZK930.1a 11913945 11914370 -1
CDS:ZK930.1a 11915425 11915703 -1
CDS:ZK930.1a 11915751 11915845 -1

1 Sequence

Length
4065

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK930.1a.1 ZK930.1a.1 4236   II: 11908725-11915852