WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE28080 Name  PXF-1, isoform a
Molecular Weight (kDa)  163.8 Length  1470
Organism  Caenorhabditis elegans MD5 Checksum  9c8f39f191132db184e6b379c41d8678
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1470
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T14G10.2a T14G10.2a 4413   IV: 10164609-10164646

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

33 Motifs

WormBase ID
INTERPRO:IPR008937
INTERPRO:IPR001895
INTERPRO:IPR036964
PFAM:PF00618
INTERPRO:IPR023578
SMART:SM00229
PFAM:PF00617
SMART:SM00147
SUPERFAMILY:SSF48366
INTERPRO:IPR000651
HMMPANTHER:PTHR23113
PFSCAN:PS50212
PFSCAN:PS50009
SUPERFAMILY:SSF50156
INTERPRO:IPR001478
INTERPRO:IPR036034
SUPERFAMILY:SSF54236
INTERPRO:IPR029071
PFSCAN:PS50106
SMART:SM00228
PFAM:PF00595
INTERPRO:IPR014710
SCANPROSITE:PS00720
PFSCAN:PS50200
SMART:SM00100
INTERPRO:IPR000595
PFSCAN:PS50042
SUPERFAMILY:SSF51206
INTERPRO:IPR018490
INTERPRO:IPR000159