WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T14G10.2a Sequence Name  T14G10.2a
Length (nt)  4413   Chromosome Location  IV: 10164609-10164646
Chromosome . Primary Identifier  IV Chromosome Location . Start  10164609
Chromosome Location . End  10164646
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T14G10.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28080 PXF-1, isoform a 163.8 1470 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00053331
WBRNAi00099893
WBRNAi00100470
WBRNAi00018716
WBRNAi00101880
WBRNAi00035570
WBRNAi00100844
WBRNAi00099691
WBRNAi00099287
WBRNAi00099489
WBRNAi00062373
WBRNAi00060546
WBRNAi00060545
WBRNAi00060547
WBRNAi00060548
WBRNAi00100096
WBRNAi00100283
WBRNAi00100657
WBRNAi00101031

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T14G10.2a 10164609 10164646 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004254 pxf-1 T14G10.2 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:T14G10.2a 10164609 10164646 -1
CDS:T14G10.2a 10164696 10165009 -1
CDS:T14G10.2a 10165395 10165533 -1
CDS:T14G10.2a 10165965 10166120 -1
CDS:T14G10.2a 10166468 10166704 -1
CDS:T14G10.2a 10167020 10167248 -1
CDS:T14G10.2a 10167299 10167575 -1
CDS:T14G10.2a 10167623 10167862 -1
CDS:T14G10.2a 10167908 10168108 -1
CDS:T14G10.2a 10168165 10168903 -1
CDS:T14G10.2a 10168952 10170308 -1
CDS:T14G10.2a 10170740 10170847 -1
CDS:T14G10.2a 10171669 10171744 -1
CDS:T14G10.2a 10173261 10173344 -1
CDS:T14G10.2a 10174033 10174160 -1
CDS:T14G10.2a 10174241 10174330 -1

1 Sequence

Length
4413

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T14G10.2a.1 T14G10.2a.1 4745   IV: 10164288-10174341