WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE24638 Name  LIN-45, isoform c
Molecular Weight (kDa)  88.8 Length  798
Organism  Caenorhabditis elegans MD5 Checksum  f4ff6760651f48ab90482f5cb7e14108
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
798
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y73B6A.5c Y73B6A.5c 2397   IV: 6743238-6743465

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

25 Motifs

WormBase ID
Active_site
SCANPROSITE:PS00479
SMART:SM00109
SUPERFAMILY:SSF57889
PFSCAN:PS50081
INTERPRO:IPR002219
PFAM:PF00130
INTERPRO:IPR046349
SUPERFAMILY:SSF56112
INTERPRO:IPR001245
INTERPRO:IPR011009
PFAM:PF07714
PFSCAN:PS50011
INTERPRO:IPR000719
SMART:SM00220
SCANPROSITE:PS00107
SCANPROSITE:PS00108
SUPERFAMILY:SSF54236
INTERPRO:IPR029071
HMMPANTHER:PTHR23257
INTERPRO:IPR003116
PFAM:PF02196
SMART:SM00455
PFSCAN:PS50898
INTERPRO:IPR050167