WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y73B6A.5c Sequence Name  Y73B6A.5c
Length (nt)  2397   Chromosome Location  IV: 6743238-6743465
Chromosome . Primary Identifier  IV Chromosome Location . Start  6743238
Chromosome Location . End  6743465
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y73B6A.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24638 LIN-45, isoform c 88.8 798 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00101974
WBRNAi00085747
WBRNAi00108282
WBRNAi00001878
WBRNAi00058308
WBRNAi00097649
WBRNAi00087949
WBRNAi00064628
WBRNAi00087963
WBRNAi00097646

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y73B6A.5c 6743238 6743465 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003030 lin-45 Y73B6A.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y73B6A.5c 6743238 6743465 -1
CDS:Y73B6A.5c 6743987 6744398 -1
CDS:Y73B6A.5c 6744448 6744544 -1
CDS:Y73B6A.5c 6744591 6744849 -1
CDS:Y73B6A.5c 6745067 6745189 -1
CDS:Y73B6A.5c 6745235 6745449 -1
CDS:Y73B6A.5c 6745623 6745746 -1
CDS:Y73B6A.5c 6745797 6746096 -1
CDS:Y73B6A.5c 6746456 6746716 -1
CDS:Y73B6A.5c 6746769 6746891 -1
CDS:Y73B6A.5c 6746943 6747125 -1
CDS:Y73B6A.5c 6748353 6748424 -1

1 Sequence

Length
2397

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y73B6A.5c.1 Y73B6A.5c.1 3245   IV: 6742538-6748572