WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CN34992 Name  Cbn-PTP-1
Molecular Weight (kDa)  112.5 Length  1001
Organism  Caenorhabditis brenneri MD5 Checksum  52071ea716c7753a4ec1bcea14411663
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1 Organism

Name Taxon Id
Caenorhabditis brenneri 135651

Proteins

1 Sequence

Length
1001
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBN31589 CBN31589   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. brenneri protein sequence (Fasta)  

42 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
INTERPRO:IPR003595
INTERPRO:IPR029021
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
PFSCAN:PS50055
PRINTS:PR00700
INTERPRO:IPR001478
PFAM:PF00595
SUPERFAMILY:SSF50156
PFSCAN:PS50057
SMART:SM01196
SMART:SM00295
PFAM:PF09380
INTERPRO:IPR036034
SCANPROSITE:PS00660
PFAM:PF00373
SUPERFAMILY:SSF47031
INTERPRO:IPR018980
INTERPRO:IPR019749
INTERPRO:IPR035963
PRINTS:PR00935
PFSCAN:PS50056
SCANPROSITE:PS00383
SUPERFAMILY:SSF54236