WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA49398 Name  Cjp-DIG-1, isoform a
Molecular Weight (kDa)  988.6 Length  9369
Organism  Caenorhabditis japonica MD5 Checksum  5624528cd06f157389d411a2b8682a33
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
9369
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14364a CJA14364a   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

35 Motifs

WormBase ID
PFSCAN:PS50234
SMART:SM00327
INTERPRO:IPR002035
INTERPRO:IPR036465
SUPERFAMILY:SSF53300
SUPERFAMILY:SSF57196
SCANPROSITE:PS01187
SMART:SM00179
SMART:SM00181
INTERPRO:IPR000742
INTERPRO:IPR001881
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
INTERPRO:IPR013783
PFSCAN:PS50835
PFSCAN:PS50853
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
SMART:SM00060
INTERPRO:IPR036116
INTERPRO:IPR003598
INTERPRO:IPR003599
SMART:SM00409
PFAM:PF00041
SMART:SM00408
PFAM:PF00092
HMMPANTHER:PTHR24366
PFAM:PF13927
PFAM:PF00047
INTERPRO:IPR013151