WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP70930 Name  PPA00271
Molecular Weight (kDa)  288.4 Length  2604
Organism  Pristionchus pacificus MD5 Checksum  f2c8902a8b6b6696a8069c88241de2db
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2604
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA00271 PPA00271   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

26 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR014001
SMART:SM00490
SMART:SM00487
PFAM:PF00271
INTERPRO:IPR001650
PFSCAN:PS51194
PFSCAN:PS51192
PFSCAN:PS50013
PFAM:PF00385
INTERPRO:IPR016197
SMART:SM00298
SUPERFAMILY:SSF54160
INTERPRO:IPR000953
INTERPRO:IPR023780
PFAM:PF00176
INTERPRO:IPR000330
INTERPRO:IPR038718
SUPERFAMILY:SSF160481
PFAM:PF07533
INTERPRO:IPR037259
INTERPRO:IPR006576
HMMPANTHER:PTHR45623
SMART:SM00592
HMMPANTHER:PTHR45623:SF11