WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP62548 Name  PPA08531
Molecular Weight (kDa)  254.3 Length  2281
Organism  Pristionchus pacificus MD5 Checksum  e5759210484351b042f73f019b41cd36
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2281
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA08531 PPA08531   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

37 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
PFSCAN:PS50294
SMART:SM00320
PFAM:PF00400
SUPERFAMILY:SSF50978
INTERPRO:IPR001680
INTERPRO:IPR015943
INTERPRO:IPR036322
PFSCAN:PS50082
SUPERFAMILY:SSF49879
INTERPRO:IPR008984
SMART:SM00240
INTERPRO:IPR000253
INTERPRO:IPR014001
SMART:SM00490
SMART:SM00487
PFAM:PF00271
PFAM:PF00270
INTERPRO:IPR001650
INTERPRO:IPR011545
PFSCAN:PS51194
PFSCAN:PS51192
HMMPANTHER:PTHR23308
PFSCAN:PS50006
PFAM:PF00498
SCANPROSITE:PS00678
PFSCAN:PS51195
SCANPROSITE:PS00039
SMART:SM01178