WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP70815 Name  Ppa-CNT-2
Molecular Weight (kDa)  142.6 Length  1307
Organism  Pristionchus pacificus MD5 Checksum  681931c588cdf325c679de97e8ae3d47
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1307
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA14404 PPA14404   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

30 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
PFSCAN:PS50297
PFSCAN:PS50088
SMART:SM00248
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
INTERPRO:IPR036770
INTERPRO:IPR020683
SMART:SM00174
SMART:SM00173
SMART:SM00175
PFAM:PF00071
PFSCAN:PS51419
INTERPRO:IPR001806
INTERPRO:IPR037278
INTERPRO:IPR038508
PRINTS:PR00405
PFSCAN:PS50115
SMART:SM00105
PFAM:PF01412
INTERPRO:IPR001164
SUPERFAMILY:SSF57863
HMMPANTHER:PTHR45819
HMMPANTHER:PTHR45819:SF5